.PHONY: install train test lint format clean docs preprocess run help

# EMCAD 项目 Makefile
# 提供常用命令的快捷入口

# 安装依赖
install:
	pip install -r requirements.txt
	pip install -e .

# 运行训练 (Synapse 数据集)
train: export CUDA_VISIBLE_DEVICES=0
	python scripts/train_synapse.py --cfg configs/default.yaml

# 运行训练 (ACDC 数据集)
train-acdc: export CUDA_VISIBLE_DATA_DEVICES=0
	python scripts/train_acdc.py --cfg configs/default.yaml

# 运行测试
test:
	python -m pytest tests/ -v --tb=short

# 运行特定测试文件
test-synapse:
	python -m pytest tests/test_synapse.py -v --tb=short

# 代码检查 (ruff)
lint:
	ruff check src/ tests/
	ruff check scripts/

# 代码格式化 (ruff)
format:
	ruff format src/ tests/ scripts/
	isort src/ tests/ scripts/

# 类型检查 (mypy, 如果安装了的话)
typecheck:
	mypy src/ --ignore-missing-imports || echo "mypy not installed, skipping type check"

# 完整代码质量检查
check: lint format typecheck

# 数据预处理 (Synapse)
preprocess-synapse:
	python src/utils/preprocess_synapse_data.py

# 数据预处理 (ACDC)
preprocess-acdc:
	python src/utils/preprocess_acdc_data.py

# 清理临时文件
clean:
	find . -type d -name "__pycache__" -exec rm -rf {} + 2>/dev/null || true
	find . -type f -name "*.pyc" -delete 2>/dev/null || true
	find . -type d -name ".pytest_cache" -exec rm -rf {} + 2>/dev/null || true
	find . -type d -name "*.egg-info" -exec rm -rf {} + 2>/dev/null || true
	rm -rf .coverage htmlcov/ .mypy_cache/ .ruff_cache/

# 清理实验输出
clean-experiments:
	rm -rf experiments/ logs/ *.log

# 清理所有生成的文件
clean-all: clean clean-experiments

# 构建文档
docs:
	cd docs && make html || sphinx-build -b html docs/source docs/build

# 查看文档
docs-serve:
	cd docs && make livehtml || sphinx-autobuild docs/source docs/build --host 0.0.0.0 --port 8000

# 运行示例推理
run-inference:
	python scripts/inference.py --cfg configs/default.yaml --checkpoint experiments/latest.pth --input input.png

# 创建实验目录结构
setup-dirs:
	mkdir -p experiments/ logs/ model_pth/ pretrained_pth/

# 显示帮助信息
help:
	@echo "EMCAD 项目 Makefile 命令:"
	@echo ""
	@echo "  install          - 安装项目依赖"
	@echo "  train            - 运行 Synapse 数据集训练"
	@echo "  train-acdc       - 运行 ACDC 数据集训练"
	@echo "  test             - 运行所有测试"
	@echo "  test-synapse     - 运行 Synapse 测试"
	@echo "  lint             - 代码检查 (ruff)"
	@echo "  format           - 代码格式化 (ruff, isort)"
	@echo "  typecheck        - 类型检查 (mypy)"
	@echo "  check            - 完整代码质量检查"
	@echo "  preprocess-synapse - 预处理 Synapse 数据"
	@echo "  preprocess-acdc  - 预处理 ACDC 数据"
	@echo "  clean            - 清理 Python 缓存文件"
	@echo "  clean-experiments - 清理实验输出"
	@echo "  clean-all        - 清理所有生成的文件"
	@echo "  docs             - 构建文档"
	@echo "  docs-serve       - 启动文档预览服务器"
	@echo "  run-inference    - 运行示例推理"
	@echo "  setup-dirs       - 创建目录结构"
	@echo "  help             - 显示此帮助信息"